Amborella
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| It is endemic to New Caledonia[2] | |
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Amborella is a monotypic genus of understory shrubs or small trees endemic to the main island, Grande Terre, of New Caledonia in the southwest Pacific Ocean.[5] The genus is the only member of the family Amborellaceae and the order Amborellales and contains a single species, Amborella trichopoda.[6] Amborella is of great interest to plant systematists because molecular phylogenetic analyses consistently place it as the sister group to all other flowering plants; as a result, it is critical for understanding angiosperm evolution. It is understood to be the most basal extant flowering plant,[7] and is one of several groups treated as "basal angiosperms".[8]
Description
Amborella is a sprawling shrub or small tree up to 8 metres (26 feet) high. It bears alternate, simple evergreen leaves without stipules.[6][9] The leaves are two-ranked, with distinctly serrated or rippled margins, and about 8 to 10 centimetres (3 to 4 inches) long.[9]
Amborella has xylem tissue that differs from that of most other flowering plants. The xylem of Amborella contains only tracheids; vessel elements are absent.[10] Xylem of this form has long been regarded as a primitive feature of flowering plants.[11]
The species is dioecious. This means that each plant produces either male flowers (meaning that they have functional stamens) or female flowers (flowers with functional carpels), but not both.[12] At any one time, a dioecious plant produces only functionally staminate or functionally carpellate flowers. Staminate ("male") Amborella flowers do not have carpels, whereas the carpellate ("female") flowers have non-functional "staminodes", structures resembling stamens in which no pollen develops. Plants may change from one reproductive morphology to the other. In one study, seven cuttings from a staminate plant produced, as expected, staminate flowers at their first flowering, but three of the seven produced carpellate flowers at their second flowering.[8]
The small, creamy white flowers are arranged in inflorescences borne in the axils of foliage leaves.[13] The inflorescences have been described as cymes, with up to three orders of branching, each branch being terminated by a flower.[13] Each flower is subtended by bracts.[13] The bracts transition into a perianth of undifferentiated tepals.[13] The tepals typically are arranged in a spiral, but sometimes are whorled at the periphery.
Carpellate flowers are roughly Page Template:Fraction/styles.css has no content.3 to 4 millimetres (1⁄8 to 3⁄16 in) in diameter, with 7 or 8 tepals. There are 1 to 3 (or rarely 0) well-differentiated staminodes and a spiral of 4 to 8 free (apocarpous) carpels. Carpels bear green ovaries; they lack a style. They contain a single ovule with the micropyle directed downwards. Staminate flowers are approximately 4 to 5 mm in diameter, with 6 to 15 tepals. These flowers bear 10 to 21 spirally arranged stamens, which become progressively smaller toward the center. The innermost may be sterile, amounting to staminodes. The stamens bear triangular anthers on short broad filaments. An anther consists of four pollen sacs, two on each side, with a small sterile central connective. The anthers have connective tips with small bumps and may be covered with secretions.[14] These features suggest that, as with other basal angiosperms, there is a high degree of developmental plasticity.[8]
Typically, 1 to 3 carpels per flower develop into fruit. The fruit is an ovoid red drupe (approximately 5 to 7 mm long and 5 mm wide) borne on a short (1 to 2 mm) stalk. The remains of the stigma can be seen at the tip of the fruit. The skin is papery, surrounding a thin fleshy layer containing a red juice. The inner pericarp is lignified and surrounds the single seed. The embryo is small and surrounded by copious endosperm.[15]
Amborella has a mixed pollination system, relying on both insect pollinators and wind.[12]
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Taxonomy
History
The Cronquist system, of 1981, classified the family:[16][17]
- Order Laurales
- Subclass Magnoliidae
- Class Magnoliopsida [=dicotyledons]
- Division Magnoliophyta [=angiosperms]
- Class Magnoliopsida [=dicotyledons]
- Subclass Magnoliidae
The Thorne system (1992) classified it:[18][19]
- Order Magnoliales
- Superorder Magnolianae
- Subclass Magnoliideae [=dicotyledons]
- Class Magnoliopsida [=angiosperms]
- Subclass Magnoliideae [=dicotyledons]
- Superorder Magnolianae
The Dahlgren system, of 1980, classified it:[20]
- Order Laurales
- Superorder Magnolianae
- Subclass Magnoliideae [=dicotyledons],
- Class Magnoliopsida [=angiosperms].
- Subclass Magnoliideae [=dicotyledons],
- Superorder Magnolianae
Modern classification
Amborella is the only genus in the family Amborellaceae. The APG II system recognized this family, but left it unplaced at order rank due to uncertainty about its relationship to the family Nymphaeaceae. In the more recent APG systems, APG III and APG IV, the Amborellaceae comprise the monotypic order Amborellales at the base of the angiosperm phylogeny.[3][21]
Phylogeny
Currently plant systematists accept Amborella trichopoda as sister to all other angiosperms.[21][7] Thus, the features of early flowering plants can be inferred by comparing derived traits shared angiosperms other than Amborella, and absent in Amborella; these traits are presumed to have evolved after the divergence of the Amborella lineage.
One early 20th century idea of "primitive" (i.e. ancestral) floral traits in angiosperms, accepted until relatively recently, is the Magnolia blossom model. This envisions flowers with numerous parts arranged in spirals on an elongated, cone-like receptacle rather than the small numbers of parts in distinct whorls of more derived flowers.
In 2005, the Floral Genome Project used chloroplast genes and expressed sequence tags for floral genes to clarify relationships between well-studied model plants such as Arabidopsis thaliana, and lineages including Amborella, Nuphar (Nymphaeaceae), Illicium, the monocots, and the eudicots. The project explicitly included phylogenetically basal angiosperms to generate insights into the genetics of the earliest flowering plants. The work generated the cladogram shown below.[22]
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This hypothesized relationship of the extant seed plants places Amborella as the sister taxon to all other angiosperms, and shows the gymnosperms as a monophyletic group sister to the angiosperms. It supports the theory that Amborella branched off from the main lineage of angiosperms before the ancestors of any other living angiosperms. There is however some uncertainty about the relationship between the Amborellaceae and the Nymphaeales: one theory is that the Amborellaceae alone are the monophyletic sister to the extant angiosperms; another proposes that the Amborellaceae and Nymphaeales form a clade that is the sister group to all other extant angiosperms.[22]
Because of its evolutionary position sister to all other angiosperms, there was support for sequencing the complete genome of Amborella trichopoda to serve as a reference for evolutionary studies. In 2010, the US National Science Foundation began a genome sequencing effort in Amborella, and the draft genome sequence was posted on the project website in December 2013.[23]
Genomic and evolutionary considerations
Amborella is of great interest to plant systematists because molecular phylogenetic analyses consistently place it as the sister group to all other angiosperms.[24][25][26][7] That is, the Amborellaceae represent a line of flowering plants that diverged very early on (more than 130 million years ago) from all the other extant species of flowering plants, and, among extant flowering plants, is the sister group to the other flowering plants.[24] Comparing characteristics of this species, other flowering plants, and fossils may provide clues about how flowers first appeared—what Darwin called the "abominable mystery".[27] This position is consistent with a number of conservative characteristics of its physiology and morphology; for example, the wood of Amborella lacks the vessels characteristic of most flowering plants.[6] The genes responsible for floral traits like scent and colors in other angiosperms, have yet to be found.[28] Further, the female gametophyte of Amborella contains eight cells, one cell more than the seven-celled Polygonum-type female gametophyte found in the majority of angiosperms.[29][30]
Amborella, being an understory plant in the wild, is commonly in intimate contact with shade- and moisture-dependent organisms such as algae, lichens and mosses. In those circumstances, some horizontal gene transfer between Amborella and such associated species is not surprising in principle, but the scale of such transfer has caused considerable surprise. Sequencing the Amborella mitochondrial genome revealed that for every gene of its own origin, it contains about six versions from the genomes of an assortment of the plants and algae growing with or upon it. The evolutionary and physiological significance of this is not as yet clear, nor in particular is it clear whether the horizontal gene transfer has anything to do with the apparent stability and conservatism of the species.[31][32]
Conservation
The islands of New Caledonia are a biodiversity hot-spot, preserving many early diverging lineages of plants, of which Amborella is but one. This preservation has been ascribed to climate stability during and since the Tertiary (ERROR! Start of period Tertiary unknown, perhaps because it was mis-spelt or because it is missing from Template:Period start.), stability that has permitted the continued survival of tropical forests on New Caledonia. In contrast, drought conditions dominated the Australian climate towards the end of the Tertiary. Current threats to biodiversity in New Caledonia include fires, mining, agriculture, invasion by introduced species, urbanization and global warming.[25] The importance of conserving Amborella has been dramatically stated by Pillon: "The disappearance of Amborella trichopoda would imply the disappearance of a genus, a family and an entire order, as well as the only witness to at least 140 million years of evolutionary history."Lua error in package.lua at line 80: module 'Module:Footnotes/anchor_id_list' not found. Conservation strategies targeted on relict species are recommended, both preserving a diversity of habitats in New Caledonia and ex situ conservation in cultivation.[25] The IUCN conservation status is Least Concern (LC).[2]
References
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- ^ a b c Page Module:Citation/CS1/styles.css has no content."An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III". Botanical Journal of the Linnean Society. 161 (2): 105–121. 2009. doi:10.1111/j.1095-8339.2009.00996.x. hdl:10654/18083.
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- ^ Page Module:Citation/CS1/styles.css has no content.Jérémie, J. (1982). "Amborellacées". In A. Aubréville; J. F. Leroy (eds.). Flore de La Nouvelle-Calédonie et Dépendances (in français). Vol. 11. Paris: Muséum National d'Histoire Naturelle. pp. 157–160.
- ^ a b c Page Module:Citation/CS1/styles.css has no content.Große-Veldmann, B.; Korotkova, N.; Reinken, B.; Lobin, W. & Barthlott, W. (2011). "Amborella trichopoda — Cultivation of the most ancestral angiosperm in botanic gardens". The Journal of Botanic Garden Horticulture. 9: 143–155. Retrieved 2016-10-21.
- ^ a b c Page Module:Citation/CS1/styles.css has no content.Amborella Genome Project; Albert, Victor A.; Barbazuk, W. Bradley; dePamphilis, Claude W.; Der, Joshua P.; Leebens-Mack, James; Ma, Hong; Palmer, Jeffrey D.; Rounsley, Steve; Sankoff, David; Schuster, Stephan C.; Soltis, Douglas E.; Soltis, Pamela S.; Wessler, Susan R.; Wing, Rod A. (2013-12-20). "The Amborella Genome and the Evolution of Flowering Plants". Science. 342 (6165) 1241089. doi:10.1126/science.1241089. hdl:10835/20046. ISSN 0036-8075. PMID 24357323.
- ^ a b c Page Module:Citation/CS1/styles.css has no content.Buzgo, M.; Soltis, P. S. & Soltis, D. E. (2004). "Floral Developmental Morphology of Amborella trichopoda (Amborellaceae)". International Journal of Plant Sciences. 165 (6): 925–947. Bibcode:2004IJPlS.165..925B. doi:10.1086/424024. S2CID 84793812.
- ^ a b Page Module:Citation/CS1/styles.css has no content.Simpson, M.G. (2010). Plant Systematics (2nd ed.). Elsevier. p. 186
- ^ Page Module:Citation/CS1/styles.css has no content.Carlquist, S. J. & Schneider, E. L. (2001). "Vegetative anatomy of the New Caledonian endemic Amborella trichopoda: relationships with the Illiciales and implications for vessel origin". Pacific Science. 55 (3): 305–312. doi:10.1353/psc.2001.0020. hdl:10125/2455. S2CID 35832198.
- ^ Page Module:Citation/CS1/styles.css has no content.Sporne, K.R. (1974). The Morphology of Angiosperms. London: Hutchinson. ISBN 978-0-09-120611-6. p. 98.
- ^ a b Page Module:Citation/CS1/styles.css has no content.Thien, L. B.; Sage, T. L.; Jaffré, T.; Bernhardt, P.; Pontieri, V.; Weston, P. H.; Malloch, D.; Azuma, H.; Graham, S. W.; McPherson, M. A.; Rai, H. S.; Sage, R. F. & Dupre, J.-L. (2003). "The Population Structure and Floral Biology of Amborella trichopoda (Amborellaceae)". Annals of the Missouri Botanical Garden. 90 (3): 466–490. Bibcode:2003AnMBG..90..466T. doi:10.2307/3298537. JSTOR 3298537.
- ^ a b c d Page Module:Citation/CS1/styles.css has no content.Posluszny, U.; Tomlinson, P.B. (2003), "Aspects of inflorescence and floral development in the putative basal angiosperm Amborella trichopoda (Amborellaceae)", Canadian Journal of Botany, 81 (1): 28–39, Bibcode:2003CaJB...81...28P, doi:10.1139/b03-004
- ^ Page Module:Citation/CS1/styles.css has no content.Endress, P. K. & Igersheim, Anton (2000). "The Reproductive Structures of the Basal Angiosperm Amborella trichopoda (Amborellaceae)". International Journal of Plant Sciences. Current Perspectives on Basal Angiosperms. 161 (S6): S237–S248. Bibcode:2000IJPlS.161S.237E. doi:10.1086/317571. S2CID 84820330.
- ^ Page Module:Citation/CS1/styles.css has no content.Floyd, S.K. & Friedman, W.E. (2001). "Developmental evolution of endosperm in basal angiosperms: evidence from Amborella (Amborellaceae), Nuphar (Nymphaceae), and Illicium (Illiciaceae)". Plant Systematics and Evolution. 228 (3–4): 153–169. Bibcode:2001PSyEv.228..153F. doi:10.1007/s006060170026. S2CID 2142920.
- ^ Page Module:Citation/CS1/styles.css has no content.Cronquist, A. (1981). An integrated system of classification of flowering plants. New York: Columbia University Press. ISBN 978-0-231-03880-5.
- ^ Page Module:Citation/CS1/styles.css has no content.Cronquist, A. (1988). The evolution and classification of flowering plants (2nd ed.). Bronx, NY: New York Botanical Garden.
- ^ Page Module:Citation/CS1/styles.css has no content.Thorne, Robert F. (1992). "Classification and geography of flowering plants". Botanical Review. 58 (3): 225–348. Bibcode:1992BotRv..58..225T. doi:10.1007/BF02858611. S2CID 40348158.
- ^ Page Module:Citation/CS1/styles.css has no content.Thorne, Robert F. (1992). "An updated phylogenetic classification of the flowering plants". Aliso. 13 (2): 365–389. doi:10.5642/aliso.19921302.08. S2CID 85738663.
- ^ Page Module:Citation/CS1/styles.css has no content.Dahlgren, R.M.T. (1980). "A revised system of classification of the angiosperms". Botanical Journal of the Linnean Society. 80 (2): 91–124. doi:10.1111/j.1095-8339.1980.tb01661.x.
- ^ a b Page Module:Citation/CS1/styles.css has no content."An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG IV", Botanical Journal of the Linnean Society, 181 (1): 1–20, 2016, doi:10.1111/boj.12385
- ^ a b Page Module:Citation/CS1/styles.css has no content.Albert, V. A.; Soltis, D. E.; Carlson, J. E.; Farmerie, W. G.; Wall, P. K.; Ilut, D. C.; Solow, T. M.; Mueller, L. A.; Landherr, L. L.; Hu, Y.; Buzgo, M.; Kim, S.; Yoo, M.-J.; Frohlich, M. W.; Perl-Treves, R.; Schlarbaum, S. E.; Zhang, X.; Tanksley, S. D.; Oppenheimer, D. G.; Soltis, P. S.; Ma, H.; dePamphilis, C. W. & Leebens-Mack, H. (2005). "Floral gene resources from basal angiosperms for comparative genomics research". BMC Plant Biology. 5 (1) 5. Bibcode:2005BMCPB...5....5A. doi:10.1186/1471-2229-5-5. PMC 1083416. PMID 15799777.
- ^ Page Module:Citation/CS1/styles.css has no content."Amborella Genome Database". Archived from the original on 2020-01-29. Retrieved 2017-12-21.
- ^ a b Page Module:Citation/CS1/styles.css has no content.Soltis, P. S. & Soltis, D. E. (2013). "Angiosperm Phylogeny: A Framework for Studies of Genome Evolution". In Leitch, Ilia J.; Greilhuber, Johann; Doležel, Jaroslav & Wendel, Jonathan F. (eds.). Plant Genome Diversity Volume 2. Springer. pp. 1–11. doi:10.1007/978-3-7091-1160-4_1. ISBN 978-3-7091-1160-4.
- ^ a b c Page Module:Citation/CS1/styles.css has no content.Pillon, Y. (2008). Biodiversité, origine et évolution des Cunoniaceae: implications pour la conservation de la flore de Nouvelle-Calédonie (PDF) (PhD) (in français and English). University of New Caledonia. Retrieved 2013-06-22.
- ^ Page Module:Citation/CS1/styles.css has no content.Drew, B. T.; Ruhfel, B. R.; Smith, S. A.; Moore, M. J.; Briggs, B. G.; Gitzendanner, M. A.; Soltis, P. S.; Soltis, D. E. (2014). "Another Look at the Root of the Angiosperms Reveals a Familiar Tale". Systematic Biology. 63 (3): 368–382. doi:10.1093/sysbio/syt108. PMID 24391149.
- ^ Page Module:Citation/CS1/styles.css has no content.Friedman, W. E. (2009), "The meaning of Darwin's "abominable mystery"", American Journal of Botany, 96 (1): 5–21, Bibcode:2009AmJB...96....5F, doi:10.3732/ajb.0800150, PMID 21628174
- ^ Water lily genome expands picture of the early evolution of flowering plants
- ^ Page Module:Citation/CS1/styles.css has no content.Rudall, Paula (2006). "How many nuclei make an embryo sac in flowering plants?". BioEssays. 28 (11): 1067–1071. doi:10.1002/bies.20488. PMID 17041880.
- ^ Page Module:Citation/CS1/styles.css has no content.Doyle, J.A. (2017). "1 Phylogenetic Analyses and Morphological Innovations in Land Plants". In Roberts, J.A (ed.). Annual Plant Reviews online. pp. 1–50. doi:10.1002/9781119312994.apr0486. ISBN 978-1-119-31299-4.
- ^ Megan Scudellari. Genomes Gone Wild, January 1, 2014 |
- ^ Page Module:Citation/CS1/styles.css has no content.Rice, D. W.; Alverson, A. J.; Richardson, A. O.; Young, G. J.; Sanchez-Puerta, M. V.; Munzinger, J.; Barry, K.; Boore, J. L.; Zhang, Y.; dePamphilis, C. W.; Knox, E. B.; Palmer, J. D. (19 December 2013). "Horizontal Transfer of Entire Genomes via Mitochondrial Fusion in the Angiosperm Amborella". Science. 342 (6165): 1468–1473. Bibcode:2013Sci...342.1468R. doi:10.1126/science.1246275. hdl:11336/2616. PMID 24357311. S2CID 2499045.
Further reading
- Page Module:Citation/CS1/styles.css has no content.Bailey, I.W. & Swamy, B.G.L. (1948). "Amborella trichopoda Baill., a new morphological type of vesselless dicotyledon". Journal of the Arnold Arboretum. 29 (3): 245–254. doi:10.5962/p.324625. JSTOR 43781302. S2CID 240346942.
- Page Module:Citation/CS1/styles.css has no content.Endress, P.K.; Igersheim, A. (2000). "The reproductive structures of the basal angiosperm Amborella trichopoda (Amborellaceae)". International Journal of Plant Sciences. 161(supplement) (S6): S237–S248. Bibcode:2000IJPlS.161S.237E. doi:10.1086/317571. S2CID 84820330.
- Page Module:Citation/CS1/styles.css has no content.Soltis, D. E.; Albert, V. A.; Leebens-Mack, J.; Palmer, J. D.; Wing, Rod A.; dePamphilis, Claude W.; Ma, Hong; Carlson, John E.; Altman, Naomi; Kim, Sangtae; Wall, P. K.; Zuccolo, A. & Soltis, P. S. (2008). "The Amborella genome: an evolutionary reference for plant biology". Genome Biology. 9 (3): 402.1 – 402.6. doi:10.1186/gb-2008-9-3-402. PMC 2397498. PMID 18341710.
- Page Module:Citation/CS1/styles.css has no content.Zuccolo, A.; Bowers, J. E.; Estill, J. C.; Xiong, Z.; Luo, M.; Sebastian, A.; Goicoechea, J. L.; Collura, K.; Yu, Y.; Jiao, Y.; Duarte, J.; Tang, H.; Ayyampalayam, S.; Rounsley, S.; Kudrna, D.; Paterson, A. H.; Pires, J. C.; Chanderbali, A.; Soltis, D. E.; Chamala, S.; Barbazuk, B.; Soltis, P. S.; Albert, V. A.; Ma, H.; Mandoli, D.; Banks, J.; Carlson, J. E.; Tomkins, J.; dePamphilis, C. W.; Wing, R. A. & Leebens-Mack, J. (2011). "A physical map for the Amborella trichopoda genome sheds light on the evolution of angiosperm genome structure". Genome Biology. 12 (5): R48. doi:10.1186/gb-2011-12-5-r48. PMC 3219971. PMID 21619600.
External links
- The Amborella Genome Sequencing Project Script error: No such module "webarchive".
- Amborellaceae Script error: No such module "webarchive". in L. Watson and M.J. Dallwitz (1992 onwards). The families of flowering plants: descriptions, illustrations, identification, information retrieval. Script error: No such module "webarchive". via Description language for taxonomy Script error: No such module "webarchive".
- Ancient plant provides clues to evolutionary mystery (National Science Foundation) Script error: No such module "webarchive".
- National Tropical Botanical Garden (Hawaii, United States), article with detailed photos of plants in cultivation
- Nova "First Flower" (transcript)
- NCBI Taxonomy Browser
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