Tim Hubbard

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Template:Short description Script error: No such module "Template wrapper".Script error: No such module "Check for conflicting parameters".Timothy John Phillip Hubbard is a Professor of Bioinformatics at King's College London, Head of Genome Analysis at Genomics England and Honorary Faculty at the Wellcome Trust Sanger Institute in Cambridge, UK.[1][2][3][4][5][6][7] From 1 March 2024, Hubbard became the director of Europe's Life Science Data Infrastructure ELIXIR.[8]

Education

Hubbard was educated at the University of Cambridge where he was awarded a Bachelor of Arts degree in Natural Sciences (Biochemistry) in 1985. He went on to do research in protein design in the Department of Crystallography, Birkbeck College, London where he was awarded a PhD in 1988[9] for research supervised by Tom Blundell.

Research and career

Hubbard's research interests are in Bioinformatics, Computational biology and Genome Informatics.[10] During his tenure at WTSI he supervised several successful PhD students to completion in these areas of research.[11][12][13][14][15][16]

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Following a postdoctoral fellowship at the Protein Engineering Research Institute in Osaka under the EU scientific training program in Japan (1989-90) he returned to Cambridge becoming a Zeneca Fellow at the Medical Research Council (MRC), Centre for Protein Engineering. In 1997 he joined the Wellcome Trust Sanger Institute to become Head of Human Genome Analysis. Tim was Head of Informatics from 2007 to 2013, when he was seconded part time as specialist advisor to NHS England, involved in delivering genomics for health programmes.[17]

Hubbard was appointed Professor of Bioinformatics at King's in October 2013.[18] His research has been published in leading peer reviewed scientific journals including Nature,[19][20][21] the Journal of Molecular Biology,[22][23] Nucleic Acids Research,[24][25] Genome Biology,[26] Nature Methods,[27] Nature Reviews Cancer[28] and Bioinformatics.[29] His research been funded by the Medical Research Council (MRC) and the Biotechnology and Biological Sciences Research Council (BBSRC).[30]

References

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  1. ^ Cite error: The named reference genomicsengland was invoked but never defined (see the help page).
  2. ^ Template:Twitter
  3. ^ Hubbard, Tim J P's publications indexed by the Scopus bibliographic database. (subscription required)
  4. ^ Template:ACMPortal
  5. ^ {{DBLP}} template missing ID and not present in Wikidata.
  6. ^ Page Module:Citation/CS1/styles.css has no content.Hopkin, Karen (2009-10-01). "Tim Hubbard: Genome Guru". The Scientist. Archived from the original on 2014-03-04.
  7. ^ Tim Hubbard publications from Europe PubMed CentralTemplate:EditAtWikidata
  8. ^ Page Module:Citation/CS1/styles.css has no content."Tim Hubbard to be new ELIXIR Director". 2023-12-01.
  9. ^ Page Module:Citation/CS1/styles.css has no content.Hubbard, Tim (1988). The design, expression and characterisation of a novel protein (PhD thesis). University of London. Archived from the original on 2015-05-19.
  10. ^ Cite error: The named reference googlescholar was invoked but never defined (see the help page).
  11. ^ Page Module:Citation/CS1/styles.css has no content.Brosch, Markus (2010). Development of computational methods for analysing proteomic data for genome annotation (PhD thesis). University of Cambridge. OCLC 890149364.
  12. ^ Page Module:Citation/CS1/styles.css has no content.Down, Thomas Alexander (2004). Computational localization of promoters and transcription start sites in mammalian genomes (PhD thesis). University of Cambridge.
  13. ^ Page Module:Citation/CS1/styles.css has no content.Doğruel, Mutlu (2008). Motif based computational identification of protein subcellular localisation (PhD thesis). University of Cambridge. OCLC 890154619.
  14. ^ Page Module:Citation/CS1/styles.css has no content.Mattison, Jenny (2009). Analysis of genome-wide, cancer-associated mutation datasets in mouse and human (PhD thesis). University of Cambridge. OCLC 890152898.
  15. ^ Page Module:Citation/CS1/styles.css has no content.Piipari, Matias (2011). Inference and classification of eukaryotic cis-regulatory motifs (PhD thesis). University of Cambridge.
  16. ^ Page Module:Citation/CS1/styles.css has no content.Pocock, Matthew Richard (2004). Computational analysis of genomes (PhD thesis). University of Cambridge. OCLC 890159072.
  17. ^ Page Module:Citation/CS1/styles.css has no content."Wellcome Trust Sanger Institute Honorary Faculty - Dr Tim Hubbard". Archived from the original on 2015-03-23.
  18. ^ Page Module:Citation/CS1/styles.css has no content."Professor Tim Hubbard, King's College London". Archived from the original on 2014-02-23.
  19. ^ Page Module:Citation/CS1/styles.css has no content.ENCODE Project Consortium, Birney E, Stamatoyannopoulos JA, Dutta A, Guigó R, Gingeras TR, Margulies EH, Weng Z, Snyder M, Dermitzakis ET; et al. (2007). "Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project". Nature. 447 (7146): 799–816. Bibcode:2007Natur.447..799B. doi:10.1038/nature05874. PMC 2212820. PMID 17571346.{{cite journal}}: CS1 maint: multiple names: authors list (link)
  20. ^ Page Module:Citation/CS1/styles.css has no content.Lander, E. S.; Linton, M.; Birren, B.; Nusbaum, C.; Zody, C.; Baldwin, J.; Devon, K.; Dewar, K.; Doyle, M.; Fitzhugh, W.; Funke, R.; Gage, D.; Harris, K.; Heaford, A.; Howland, J.; Kann, L.; Lehoczky, J.; Levine, R.; McEwan, P.; McKernan, K.; Meldrim, J.; Mesirov, J. P.; Miranda, C.; Morris, W.; Naylor, J.; Raymond, C.; Rosetti, M.; Santos, R.; Sheridan, A.; et al. (Feb 2001). "Initial sequencing and analysis of the human genome" (PDF). Nature. 409 (6822): 860–921. Bibcode:2001Natur.409..860L. doi:10.1038/35057062. ISSN 0028-0836. PMID 11237011.
  21. ^ Page Module:Citation/CS1/styles.css has no content.Birney, E; Bateman, A; Clamp, M. E.; Hubbard, T. J. (2001). "Mining the draft human genome". Nature. 409 (6822): 827–8. Bibcode:2001Natur.409..827B. doi:10.1038/35057004. PMC 2658632. PMID 11236999.
  22. ^ Cite error: The named reference scopu was invoked but never defined (see the help page).
  23. ^ Page Module:Citation/CS1/styles.css has no content.Park, J; Teichmann, S. A.; Hubbard, T; Chothia, C (1997). "Intermediate sequences increase the detection of homology between sequences". Journal of Molecular Biology. 273 (1): 349–54. doi:10.1006/jmbi.1997.1288. PMID 9367767.
  24. ^ Cite error: The named reference ensembl2002 was invoked but never defined (see the help page).
  25. ^ Cite error: The named reference ensembl2014 was invoked but never defined (see the help page).
  26. ^ Cite error: The named reference genomebiology was invoked but never defined (see the help page).
  27. ^ Page Module:Citation/CS1/styles.css has no content.Engström, P. R. G.; Steijger, T.; Sipos, B.; Grant, G. R.; Kahles, A.; Alioto, T.; Behr, J.; Bertone, P.; Bohnert, R.; Campagna, D.; Davis, C. A.; Dobin, A.; Engström, P. R. G.; Gingeras, T. R.; Goldman, N.; Grant, G. R.; Guigó, R.; Harrow, J.; Hubbard, T. J.; Jean, G. R.; Kahles, A.; Kosarev, P.; Li, S.; Liu, J.; Mason, C. E.; Molodtsov, V.; Ning, Z.; Ponstingl, H.; Prins, J. F.; Rätsch, G. (2013). "Systematic evaluation of spliced alignment programs for RNA-seq data". Nature Methods. 10 (12): 1185–91. doi:10.1038/nmeth.2722. PMC 4018468. PMID 24185836.
  28. ^ Page Module:Citation/CS1/styles.css has no content.Futreal, P. A.; Coin, L; Marshall, M; Down, T; Hubbard, T; Wooster, R; Rahman, N; Stratton, M. R. (2004). "A census of human cancer genes". Nature Reviews Cancer. 4 (3): 177–83. doi:10.1038/nrc1299. PMC 2665285. PMID 14993899.
  29. ^ Page Module:Citation/CS1/styles.css has no content.Reeves, G. A.; Eilbeck, K.; Magrane, M.; O'Donovan, C.; Montecchi-Palazzi, L.; Harris, M. A.; Orchard, S.; Jimenez, R. C.; Prlic, A.; Hubbard, T. J. P.; Hermjakob, H.; Thornton, J. M. (2008). "The Protein Feature Ontology: A tool for the unification of protein feature annotations". Bioinformatics. 24 (23): 2767–2772. doi:10.1093/bioinformatics/btn528. PMC 2912506. PMID 18936051.
  30. ^ Page Module:Citation/CS1/styles.css has no content."UK Government Grants awarded to Tim Hubbard". Research Councils UK. Archived from the original on 2015-04-09.

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